Our new sWGS Pipeline, SAMURAI, is now available on GitHub!
A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification of copy number alterations (CNAs). Try it on git! https://github.com/DIncalciLab/samurai
Here is our preprint https://www.biorxiv.org/content/10.1101/2024.09.30.615766v1