Research Projects
A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification of copy number alterations (CNAs). Try it on git! https://github.com/DIncalciLab/samurai
Here is our preprint https://www.biorxiv.org/content/10.1101/2024.09.30.615766v1
Our new R package for Multi-Omic data integration is finally available. Try it! https://www.bioconductor.org/packages/release/bioc/html/gINTomics.html
Our work represents the first attempt to characterize isomiRs expression in Stage I EOC within and across subtypes and to contextualize their alterations in the framework of the large genomic heterogeneity of this tumor. https://doi.org/10.1002/ijc.34408